Bioinformatics Tools

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====== Protein - ligand interaction ======
[[https://projects.biotec.tu-dresden.de/plip-web/plip/index | PLIP:]] Protein-Ligand Interaction Profiler 

[[http://poseview.zbh.uni-hamburg.de/poseview | Poseview on-line]]

[[http://www.biochem.ucl.ac.uk/bsm/ligplot/ligplot.html | LIGPLOT:]] Program for automatically plotting protein-ligand

[[http://mespeus.bch.ed.ac.uk/MESPEUS/ | MESPEUS:]]Metal Sites in Proteins - MESPEUS database

[[http://dicsoft2.physics.iisc.ernet.in/cgi-bin/mips/query.pl | MIPS:]]Metal Interactions in Protein Structures

[[http://www.charmm-gui.org/?doc=input/gbinding | The Ligand Binder:]] helps the user generate a series of CHARMM inputs to calculate a protein/ligand binding free energy.

[[http://www.biosolveit.de/PoseView/ | PoseView:]] automatically generates high-quality 2D structure-diagrams of protein-ligand complexes provided as 3D-input. Such input may come directly from crystal structures or be computed for example by a docking program.
 

[[http://metalweb.cerm.unifi.it/ | MetalPDB]] collects and allows easy access to the knowledge on metal sites in biological macromolecules, starting from the structural information contained in the Protein Data Bank (PDB)

====== Protein - Protein interaction ======


[[http://pipsa.eml.org/pipsa/pdbupload | webPIPSA:]] Protein Interaction Property Similarity Analysis

Bioinformatics Tools

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