Bioinformatics Tools

BindN for prediction of DNA and RNA binding residues in proteins

RNABindR: software for prediction of RNA binding residues in proteins

DP-Bind: a web server for sequence-based prediction of DNA-binding residues in DNA-binding proteins.

DBS-PRED: Prediction of DNA-binding in proteins using Neural Networks

DBS-PSSM (Version 3; December 2007 update): Prediction of DNA-binding residues by evolutionary profile and neural networks.

DNABR: platform for DNA binding residues in proteins

DR_bind:predict the DNA-binding residues for a given protein chain

iMOT is an automated method for identifying conserved spatially interacting regions across proteins.

HADDOCK-Server : is an information-driven flexible docking approach for the modeling of biomolecular complexes.

HADDOCK:High Ambiguity Driven biomolecular Docking.

3D-DART: DNA Modeling Server

eF-site Database: Electrostatic surface of Functional-site

MetaDBSite:a meta web server for protein DNA-binding sites prediction based on protein sequence!